BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020H06SP1|AL427683
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1062 0.0
>3x_Contig1604
Length = 15703
Score = 1062 bits (517), Expect = 0.0
Identities = 766/874 (87%), Gaps = 3/874 (0%)
Strand = Plus / Minus
Query: 1 cacatagatccggagattctgacattttagtagcantaatcaaatcttgggtcaaggcgg 60
||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 10090 cacataggtccggagattctgacattttagtagcagtgatcaaatcttgggtcaaggcgg 10031
Query: 61 tttaaatatcagtmaaggamtwtctttggaaaaattcttttgcratttccaaagaaacaa 120
||| ||| ||||| ||||| | ||||||||||| ||||||||| |||||||||||||||
Sbjct: 10030 tttgaatgtcagtgaaggagtttctttggaaaagttcttttgcgatttccaaagaaacag 9971
Query: 121 gggatttgcwagcwagcatttgcttggwctttgcaccaaacyccycaccygtttgtvaha 180
||||||||| ||| ||||||||||||| ||||||| ||||| || | | |||||| | |
Sbjct: 9970 gggatttgctagctagcatttgcttggtctttgcagcaaactcctgagctgtttgtgata 9911
Query: 181 cyatctwwccaccaataacctcatccaatttagagwaaattwachtcaaactgtwaccga 240
| ||| ||| |||| |||||||||||||| ||| | ||| | ||||||||| |||||
Sbjct: 9910 ctgtctttccagcaatgacctcatccaatttggagtagatttgcttcaaactgttaccga 9851
Query: 241 hatcaaaacactgtacaawaacgtamagttcatcaacagtatacttaaacttgtagtcwc 300
||| ||||||||| ||| |||| ||||||||| |||| ||||| ||||||||||| |
Sbjct: 9850 tatcgaaacactgttcaatgacgtttagttcatcagcagtgtacttgaacttgtagtctc 9791
Query: 301 twggwaaaaawgcgttgaattcctcaataacatggttgacaacatcaaaaawatcawcaw 360
| || || |||||||||||||||||| |||||||||||||||| |||| ||| ||
Sbjct: 9790 ttggtaatggtgcgttgaattcctcaatagcatggttgacaacatcgaaaatttcatcat 9731
Query: 361 cacggttagtcgattaaaaaatggcttcaatmaaawawaactcaaccaatcttgcctgta 420
||||||||||||||| | || |||||||| | ||| |||||| |||||||||||||||
Sbjct: 9730 cacggttagtcgattgagaagtggcttcagtcaaatgtaactcagccaatcttgcctgta 9671
Query: 421 aataggagaacwaawcaaatagcacawaawaaaaaacaacaccaaccacctaaccatccg 480
| | ||||| | | || | ||||| || | || | |||||| |||| ||| |||| |
Sbjct: 9670 agttggagatctgatcatgtggcacataatgagaagcgacaccagccacgtaagcatcgg 9611
Query: 481 caccattcaaaatgtcaccagtcatgcacaaatactgaaccaatwgtccgtcggaaccac 540
||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||||||||
Sbjct: 9610 caccattcaaaatgtcaccagtcatgcacaagtactgagccaattgtccgttggaaccac 9551
Query: 541 caacagtggtaagccttggaatagagaaagtggcaccgacatctgggaagaatccaatat 600
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9550 caacagtggtaagctttggaatagagaaagtggcaccgacatctgggaagaatccaatat 9491
Query: 601 ccatctcaggcatggcccaacgagtattttcagtagcaatacggaatggaatatgagtag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9490 ccatctcaggcatggcccaacgagtattttcagtagcaatacggaatggaatatgagtag 9431
Query: 661 atagaccgacaccaccacccatggtgatascgtscatgatagagatgascggcttgttca 720
||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||
Sbjct: 9430 atagaccgacaccaccacccatggtgataccgtccatgatagagatgaccggcttgttca 9371
Query: 721 gcktmtat-gagccaagtttaacgagtattccttkgttaaaaattctctagcgtaatcaa 779
|| | | ||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 9370 gcgtagctagagccaagtttaacgagtattccttggtgaaaaattctctagcgtaatcaa 9311
Query: 780 aadttccttcctbtaaccaacttkgctactttagctacatcgscacctgaacagaaggcg 839
|| ||||||||| |||||||||| ||||||| |||||||||| ||||||||||||||||
Sbjct: 9310 aatttccttcct-taaccaacttggctacttgagctacatcgccacctgaacagaaggcc 9252
Query: 840 ctaggactagcgtgaagagttcaagataacaaca 873
||||||||||| ||||||||||||||||||||||
Sbjct: 9251 ctaggactagc-tgaagagttcaagataacaaca 9219
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3973
Number of Sequences: 1807
Number of extensions: 3973
Number of successful extensions: 88
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 49 (101.2 bits)